Passing Touchdowns
- Since 1999
| Rk | Player | TD | Year | School |
|---|---|---|---|---|
| 1 | Derek Carr* | 50 | 2013 | Fresno State |
| 2 | Kellen Moore* | 43 | 2011 | Boise State |
| 3 | Derek Carr* | 37 | 2012 | Fresno State |
| 4 | Logan Bonner* | 36 | 2021 | Utah State |
| 4 | Carson Strong* | 36 | 2021 | Nevada |
| 4 | Cole McDonald* | 36 | 2018 | Hawaii |
| 7 | Max Hall* | 35 | 2008 | Brigham Young |
| 8 | Jake Haener* | 33 | 2021 | Fresno State |
| 8 | Cole McDonald* | 33 | 2019 | Hawaii |
| 8 | David Fales | 33 | 2013 | San Jose State |
| 8 | Max Hall* | 33 | 2009 | Brigham Young |
| 8 | Brandon Doman | 33 | 2001 | Brigham Young |
| 13 | Jordan Love* | 32 | 2018 | Utah State |
| 13 | Garrett Grayson* | 32 | 2014 | Colorado State |
| 13 | John Beck* | 32 | 2006 | Brigham Young |
| 13 | Alex Smith* | 32 | 2004 | Utah |
| 17 | Brett Rypien | 30 | 2018 | Boise State |
| 18 | Nick Stevens* | 29 | 2017 | Colorado State |
| 18 | Brett Smith | 29 | 2013 | Wyoming |
| 20 | Josh Allen* | 28 | 2016 | Wyoming |
| 20 | Sean Schroeder | 28 | 2013 | Hawaii |
| 20 | Ryan Lindley* | 28 | 2010 | San Diego State |
| 23 | Carson Strong* | 27 | 2020 | Nevada |
| 23 | Brett Smith | 27 | 2012 | Wyoming |
| 23 | Andy Dalton* | 27 | 2010 | TCU |
| 23 | Brian Johnson* | 27 | 2008 | Utah |
| 23 | John Beck* | 27 | 2005 | Brigham Young |


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